Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERP0976Tellurite resistance protein, putative; Identified by match to protein family HMM PF05816; Belongs to the TelA family. (376 aa)    
Predicted Functional Partners:
SERP0975
xpaC protein, putative; Identified by similarity to EGAD:19663.
 
  
 0.949
SERP0974
Acylphosphatase; Identified by match to protein family HMM PF00708.
       0.782
SERP0973
Conserved hypothetical protein; Identified by similarity to OMNI:SA1438.
 
     0.748
SERP0610
Integral membrane protein, TerC family; Identified by similarity to OMNI:SA1026; match to protein family HMM PF03741.
  
    0.543
cspA
Cold shock protein, CSD family; Involved in cold stress response.
       0.424
SERP0725
Bacteriocin production protein, putative; Identified by match to protein family HMM PF02674.
  
     0.409
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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