STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP0978Conserved hypothetical protein; Identified by similarity to OMNI:SA1444. (629 aa)    
Predicted Functional Partners:
SERP0979
CbbQ/NirQ/NorQ/GpvN family protein; Belongs to the CbbQ/NirQ/NorQ/GpvN family.
 
  
 0.987
SERP0980
Conserved hypothetical protein; Identified by similarity to OMNI:SA1446.
 
     0.928
brnQ-1
Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids (leucine, isoleucine and valine), which is coupled to a proton motive force.
       0.792
SERP0981
Conserved hypothetical protein; Identified by similarity to OMNI:SA1447.
       0.777
ywpF
ywpF protein; Identified by similarity to OMNI:SA2090.
  
     0.716
SERP0700
Conserved hypothetical protein; Identified by similarity to OMNI:SA1120.
  
     0.689
SERP1008
Conserved hypothetical protein; Identified by similarity to OMNI:SA1467.
  
     0.670
SERP0604
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0903; Belongs to the 2H phosphoesterase superfamily. YjcG family.
  
     0.655
SERP1212
Rod shape-determining protein MreD, putative; Identified by match to protein family HMM PF04093.
  
     0.626
traP
RNAIII-activating protein TRAP; Contributes to virulence and biofilm formation.
  
     0.624
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
Server load: medium (76%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.