Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SERP0984ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (276 aa)    
Predicted Functional Partners:
SERP0983
Hypothetical protein; Identified by Glimmer2; putative.
       0.875
modC
Molybdenum ABC transporter, ATP-binding protein ModC; Identified by match to protein family HMM PF00005.
  
     0.769
SERP1004
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
     0.767
SERP0015
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
     0.759
SERP0314
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
     0.757
ecfA2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
     0.753
SERP2204
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
     0.751
SERP2368
Peptide ABC transporter, ATP-binding protein; Identified by similarity to EGAD:10112; match to protein family HMM PF00005.
  
     0.744
SERP0951
Peptide ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM PF00005.
  
     0.727
rpsE
Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
  
     0.567
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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