Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SERP1007Conserved hypothetical protein; Identified by similarity to OMNI:SA1466. (86 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.951
SERP1008
Conserved hypothetical protein; Identified by similarity to OMNI:SA1467.
       0.869
SERP1006
Conserved hypothetical protein; Identified by similarity to OMNI:SA1464; Belongs to the UPF0403 family.
 
     0.834
SERP1009
Membrane protein, putative; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
 
     0.779
SERP0488
Thioredoxin, putative.
 
     0.720
SERP0514
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0817; match to protein family HMM PF01934.
  
     0.703
SERP0252
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0581.
  
     0.695
cydB
Cytochrome d ubiquinol oxidase, subunit II; Identified by similarity to GP:4514629.
 
     0.616
SERP1013
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA1323.
 
     0.608
ctaA
Cytochrome oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily.
  
     0.603
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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