STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP1014Conserved hypothetical protein; Identified by similarity to OMNI:NTL01XF01748. (212 aa)    
Predicted Functional Partners:
SERP1012
5'-3' exonuclease, putative; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739.
       0.700
SERP2082
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
 
    0.592
SERP1754
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA2023.
 
    0.565
SERP2425
Membrane protein, putative; Identified by match to protein family HMM PF03773.
  
    0.532
SERP0263
Endonuclease III, putative; Identified by match to protein family HMM PF00730.
  
    0.516
SERP1015
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA1326; match to protein family HMM PF01170; Belongs to the methyltransferase superfamily.
       0.498
SERP1973
General stress protein 26, putative; Identified by similarity to EGAD:107318.
  
    0.482
SERP0438
Identified by match to protein family HMM TIGR01777; Belongs to the NAD(P)-dependent epimerase/dehydratase family. SDR39U1 subfamily.
   
    0.476
SERP0494
Conserved hypothetical protein; Identified by similarity to OMNI:SA0912; match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family.
  
    0.476
lacD
Tagatose 1,6-diphosphate aldolase; Identified by similarity to EGAD:9829; match to protein family HMM PF04274; match to protein family HMM TIGR01232; Belongs to the aldolase LacD family.
   
    0.476
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.