STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP1050Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA1365. (320 aa)    
Predicted Functional Partners:
recQ-2
ATP-dependent DNA helicase RecQ; Identified by similarity to EGAD:37724; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614.
  
  
 0.956
fer
Ferredoxin; Identified by similarity to SP:P50727.
 
     0.851
ebpS
Elastin binding protein, putative; Identified by match to protein family HMM PF01476.
 
     0.842
SERP1047
Pyridine nucleotide-disulfide oxidoreductase family protein; Identified by match to protein family HMM PF00070.
       0.743
tcaA
tcaA protein; Plays a major role in decreasing resistance to glycopeptide antibiotics; Belongs to the TcaA family.
  
     0.736
SERP1375
Conserved hypothetical protein; Identified by similarity to OMNI:SA1896.
  
     0.734
SERP2148
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA2241.
  
     0.727
SERP0708
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA1003.
  
     0.726
SERP2264
Cell wall surface anchor family protein.
  
     0.722
SERP1424
Conserved hypothetical protein; Identified by similarity to OMNI:SA1944.
  
     0.721
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.