STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepAGlutamyl-aminopeptidase; Identified by similarity to EGAD:40297; match to protein family HMM PF05343. (361 aa)    
Predicted Functional Partners:
SERP1306
Conserved hypothetical protein; Identified by similarity to OMNI:SA1796.
       0.829
SERP1303
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA1621; Belongs to the UPF0354 family.
       0.805
SERP1302
Conserved hypothetical protein; Identified by similarity to OMNI:SA1792; match to protein family HMM PF01588; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.792
SERP1304
Thioredoxin, putative; Identified by match to protein family HMM PF00085.
  
    0.784
SERP1301
Identified by match to protein family HMM PF01580; Belongs to the FtsK/SpoIIIE/SftA family.
       0.781
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
    0.778
SERP1299
Conserved hypothetical protein; Identified by similarity to OMNI:SA1789.
       0.739
SERP1298
Conserved hypothetical protein; Identified by similarity to OMNI:SA1788.
       0.426
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.