Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERP1306Conserved hypothetical protein; Identified by similarity to OMNI:SA1796. (104 aa)    
Predicted Functional Partners:
pepA
Glutamyl-aminopeptidase; Identified by similarity to EGAD:40297; match to protein family HMM PF05343.
       0.764
SERP1302
Conserved hypothetical protein; Identified by similarity to OMNI:SA1792; match to protein family HMM PF01588; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.657
SERP1301
Identified by match to protein family HMM PF01580; Belongs to the FtsK/SpoIIIE/SftA family.
     
 0.653
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
       0.640
SERP1863
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.603
SERP1299
Conserved hypothetical protein; Identified by similarity to OMNI:SA1789.
       0.597
SERP1304
Thioredoxin, putative; Identified by match to protein family HMM PF00085.
  
    0.580
SERP1303
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA1621; Belongs to the UPF0354 family.
       0.498
SERP2015
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA2319.
  
   
 0.486
SERP2111
Thioredoxin, putative.
  
  
 0.459
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.