STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP1469Conserved hypothetical protein; Identified by similarity to OMNI:SA1988. (346 aa)    
Predicted Functional Partners:
traP
RNAIII-activating protein TRAP; Contributes to virulence and biofilm formation.
  
     0.699
SERP0980
Conserved hypothetical protein; Identified by similarity to OMNI:SA1446.
  
     0.697
SERP0679
Conserved hypothetical protein; Identified by similarity to OMNI:SA1101.
  
     0.671
SERP0618
ComK family protein.
  
     0.616
SERP1050
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA1365.
  
     0.599
SERP2199
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.589
SERP0634
Membrane protein, putative; Identified by similarity to OMNI:SA1059; match to protein family HMM PF01757.
  
     0.551
folE2
Conserved hypothetical protein TIGR00294; Converts GTP to 7,8-dihydroneopterin triphosphate.
  
     0.529
SERP1286
Identified by match to protein family HMM PF02566.
 
     0.529
SERP0214
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0545.
  
     0.517
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.