STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP1501Conserved hypothetical protein; Identified by similarity to EGAD:107864; match to protein family HMM PF00239. (512 aa)    
Predicted Functional Partners:
SERP2498
Cassette chromosome recombinase A; Identified by similarity to OMNI:NTL01SA0062; match to protein family HMM PF00239.
 
     0.774
SERP1502
DNA-binding protein, putative; Identified by match to protein family HMM PF00249.
       0.773
SERP1504
Hypothetical protein; Identified by Glimmer2; putative.
       0.540
SERP1503
Hypothetical protein; Identified by Glimmer2; putative.
       0.539
SERP1505
Hypothetical protein; Identified by Glimmer2; putative.
       0.539
SERP1506
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01LL0750.
       0.539
SERP1507
Conserved hypothetical protein.
       0.529
SERP1508
Thioredoxin, putative; Identified by similarity to EGAD:44482.
       0.509
SERP1509
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.452
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.