STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP1591Conserved hypothetical protein; Identified by similarity to EGAD:107455. (370 aa)    
Predicted Functional Partners:
SERP1592
Conserved hypothetical protein; Identified by similarity to EGAD:107457.
 
 
 0.962
SERP1590
single-stranded-DNA-specific exonuclease RecJ, putative; Identified by match to protein family HMM PF01368.
 
  
 0.887
SERP1593
Conserved hypothetical protein; Identified by similarity to EGAD:107458.
  
    0.789
SERP1639
Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family.
 
  
 0.757
SERP1642
Conserved hypothetical protein.
  
     0.677
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.676
der
GTP-binding protein, Era/TrmE family; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
    0.647
SERP1594
Conserved hypothetical protein; Identified by similarity to EGAD:107459.
  
    0.604
SERP1513
Truncated ribonucleoside-diphosphate reductase 2, alpha subunit; Contains a 384 residue intein; identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR01443; match to protein family HMM TIGR01445; may be nonfunctional due to interuption.
 
  
 0.592
SERP1595
Conserved hypothetical protein; Identified by similarity to EGAD:107460.
  
    0.582
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.