STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP1594Conserved hypothetical protein; Identified by similarity to EGAD:107459. (322 aa)    
Predicted Functional Partners:
SERP1592
Conserved hypothetical protein; Identified by similarity to EGAD:107457.
  
    0.714
SERP1593
Conserved hypothetical protein; Identified by similarity to EGAD:107458.
  
    0.654
SERP1595
Conserved hypothetical protein; Identified by similarity to EGAD:107460.
  
    0.648
SERP1591
Conserved hypothetical protein; Identified by similarity to EGAD:107455.
  
    0.604
pcrA
ATP-dependent DNA helicase PcrA; Essential helicase; Belongs to the helicase family. UvrD subfamily.
   
   0.579
SERP1590
single-stranded-DNA-specific exonuclease RecJ, putative; Identified by match to protein family HMM PF01368.
  
    0.536
SERP1596
Hypothetical protein; Identified by Glimmer2; putative.
       0.422
SERP1597
Hypothetical protein; Identified by Glimmer2; putative.
       0.403
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.