Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SERP1696HD domain protein; Identified by match to protein family HMM PF01966. (217 aa)    
Predicted Functional Partners:
SERP1693
Conserved hypothetical protein; Identified by similarity to OMNI:SA2077.
       0.646
SERP1694
Conserved hypothetical protein; Identified by similarity to OMNI:SA2078; match to protein family HMM PF02583.
       0.646
cls-2
Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
 
     0.562
SERP0202
Identified by match to protein family HMM PF01712.
 
     0.515
SERP1029
Conserved hypothetical protein; Identified by similarity to OMNI:SA1499; match to protein family HMM PF03819.
 
   
 0.436
copZ
Heavy metal-binding protein, putative; Chaperone that serves for the intracellular sequestration and transport of Cu(+). Delivers Cu(+) to the copper-exporting P-type ATPase A (CopA) (By similarity).
     
 0.423
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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