STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP1770Identified by match to protein family HMM PF01704; Belongs to the UDPGP type 1 family. (395 aa)    
Predicted Functional Partners:
SERP1769
Hemolysin III, putative; Identified by similarity to EGAD:38000; match to protein family HMM PF03006; match to protein family HMM TIGR01065.
       0.876
SERP1771
Conserved hypothetical protein; Identified by match to protein family HMM PF04307.
       0.851
SERP0311
Conserved hypothetical protein; Identified by similarity to OMNI:SA0715.
  
   
 0.587
SERP0719
Cell wall surface anchor family protein; Identified by match to protein family HMM PF00746; match to protein family HMM PF04650; match to protein family HMM TIGR01167; match to protein family HMM TIGR01168.
  
     0.518
SERP1241
Identified by match to protein family HMM PF00293.
  
     0.511
SERP1772
Conserved hypothetical protein; Identified by similarity to GP:14247946; Belongs to the UPF0457 family.
       0.477
SERP1768
Drug transporter, putative.
       0.475
SERP0337
Conserved hypothetical protein; Identified by similarity to OMNI:SA0742.
  
     0.463
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.430
SERP0309
Lipase/esterase, putative.
  
 
   0.402
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.