STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP1781Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA2066; match to protein family HMM PF04183. (653 aa)    
Predicted Functional Partners:
SERP1779
Conserved hypothetical protein; Identified by similarity to OMNI:SA2169; match to protein family HMM PF04183.
 
  
 
0.986
SERP1778
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA2063; match to protein family HMM PF01168.
    
  0.981
SERP1780
Transporter, putative.
       0.827
SERP1777
Iron compound ABC transporter, iron compound-binding protein; Identified by match to protein family HMM PF01497.
 
  
 0.809
sdrH
sdrH protein; Identified by similarity to GP:8101009.
  
     0.702
SERP2264
Cell wall surface anchor family protein.
  
     0.692
geh-1
Lipase; Identified by similarity to GP:2981225; match to protein family HMM PF04650; match to protein family HMM TIGR01168; Belongs to the AB hydrolase superfamily. Lipase family.
  
     0.687
aacA
6'-aminoglycoside N-acetyltransferase/2''-aminoglycoside phosphotransferase; Involved in resistance to gentamicin, tobramycin, and kanamycin. Tobramycin and kanamycin resistance is due to the ACC activity, specified by N-terminal region. The C-terminal region is a kinase that phosphorylates several 4,6-disubstituted aminoglycosides.
 
  
 0.651
SERP2336
Lipase, putative; Identified by similarity to SP:Q02510; match to protein family HMM PF04650; match to protein family HMM TIGR01168.
  
     0.623
SERP0018
Lipase, putative; Identified by match to protein family HMM PF04650; match to protein family HMM TIGR01168.
  
     0.606
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.