STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP1788Conserved hypothetical protein. (288 aa)    
Predicted Functional Partners:
dltC
D-alanyl carrier protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.
  
     0.619
dltB
dltB protein; Could be involved in the transport of activated D-alanine through the membrane.
 
     0.538
dltD
dltD protein; Identified by match to protein family HMM PF04914; match to protein family HMM PF04915; match to protein family HMM PF04918.
 
     0.532
lacG
6-phospho-beta-galactosidase; Identified by similarity to EGAD:22248; match to protein family HMM PF00232; match to protein family HMM TIGR01233; Belongs to the glycosyl hydrolase 1 family.
       0.479
lacE
PTS system, lactose-specific IIBC components; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II LacEF PTS system is involved in lactose transport.
       0.472
lacF
PTS system, lactose-specific IIA component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II LacEF PTS system is involved in lactose transport.
       0.470
lacC
Tagatose-6-phosphate kinase; Identified by similarity to EGAD:6991; match to protein family HMM PF00294; match to protein family HMM TIGR01231; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
       0.449
lacD
Tagatose 1,6-diphosphate aldolase; Identified by similarity to EGAD:9829; match to protein family HMM PF04274; match to protein family HMM TIGR01232; Belongs to the aldolase LacD family.
       0.448
lacB
Galactose-6-phosphate isomerase, LacB subunit; Identified by similarity to EGAD:16117; match to protein family HMM PF02502; match to protein family HMM TIGR00689.
       0.444
lacA
Galactose-6-phosphate isomerase, LacA subunit; Identified by similarity to EGAD:13018; match to protein family HMM PF02502; match to protein family HMM TIGR00689.
       0.435
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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