STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sarZTranscriptional regulator, MarR family; Identified by match to protein family HMM PF01047. (148 aa)    
Predicted Functional Partners:
sarA
Staphylococcal accessory regulator A; Identified by similarity to EGAD:42500; match to protein family HMM TIGR01889.
      
 0.815
sarX
Staphylococcal accessory regulator family; Identified by match to protein family HMM TIGR01889.
      
 0.790
sarR
Staphylococcal accessory regulator R; Identified by similarity to EGAD:42500; match to protein family HMM TIGR01889.
      
 0.732
SERP1978
Identified by match to protein family HMM PF00881.
  
    0.670
sarV
Staphylococcal accessory regulator V; Identified by match to protein family HMM TIGR01889.
      
 0.654
clpP
ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
   
  
 0.598
SERP2265
Organic hydroperoxide resistance protein, putative; Identified by similarity to SP:O68390; match to protein family HMM PF02566; Belongs to the OsmC/Ohr family.
 
  
 0.541
SERP0480
Identified by match to protein family HMM PF02566; Belongs to the OsmC/Ohr family.
 
  
 0.535
sarY
Staphylococcal accessory regulator Y; Identified by similarity to OMNI:NTL01SA2182; match to protein family HMM TIGR01889.
      
 0.519
perR
Transcriptional regulator, Fur family; Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor (By similarity). Belongs to the Fur family.
   
  
 0.477
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.