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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
garKGlycerate kinase 2; Identified by similarity to SP:P23524; match to protein family HMM PF02595; match to protein family HMM TIGR00045; Belongs to the glycerate kinase type-1 family. (383 aa)    
Predicted Functional Partners:
SERP0409
Glycerate kinase family protein; Identified by similarity to OMNI:NTL01SA0718; match to protein family HMM PF02595; match to protein family HMM TIGR00045.
  
  
 
0.926
gpm
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
 0.914
pgm
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.906
SERP0516
D-isomer specific 2-hydroxyacid dehydrogenase family protein; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.904
aldA-1
Aldehyde dehydrogenase; Identified by similarity to EGAD:18867; match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
   
 
  0.902
SERP1729
Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171.
   
 
  0.902
aldA-2
Aldehyde dehydrogenase; Identified by similarity to EGAD:15875; match to protein family HMM PF00171.
   
 
  0.902
SERP0052
Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family.
     
  0.900
SERP2013
Conserved hypothetical protein.
       0.677
tadA
Cytidine/deoxycytidylate deaminase family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
    0.667
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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