Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SERP2015Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA2319. (174 aa)    
Predicted Functional Partners:
SERP2264
Cell wall surface anchor family protein.
  
     0.752
SERP2063
Esterase, putative; Identified by similarity to SP:P22862.
 
     0.749
sdrH
sdrH protein; Identified by similarity to GP:8101009.
  
     0.747
geh-1
Lipase; Identified by similarity to GP:2981225; match to protein family HMM PF04650; match to protein family HMM TIGR01168; Belongs to the AB hydrolase superfamily. Lipase family.
  
     0.720
SERP0331
Conserved hypothetical protein; Identified by similarity to OMNI:SA0735.
  
     0.715
SERP2010
Conserved hypothetical protein; Identified by similarity to OMNI:SA1738.
 
     0.685
SERP2336
Lipase, putative; Identified by similarity to SP:Q02510; match to protein family HMM PF04650; match to protein family HMM TIGR01168.
  
     0.680
tcaA
tcaA protein; Plays a major role in decreasing resistance to glycopeptide antibiotics; Belongs to the TcaA family.
  
     0.668
SERP1316
Cell wall surface anchor family protein; Identified by match to protein family HMM PF00746; match to protein family HMM PF04650; match to protein family HMM TIGR01167; match to protein family HMM TIGR01168.
  
     0.650
ebpS
Elastin binding protein, putative; Identified by match to protein family HMM PF01476.
  
     0.628
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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