STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP2071Glycine oxidase, putative; Identified by match to protein family HMM PF01266. (372 aa)    
Predicted Functional Partners:
thiG
thiG protein, putative; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
 0.999
SERP2070
Thiamine-phosphate pyrophosphorylase, putative; Identified by similarity to EGAD:22506.
 
  
 0.941
thiS
Thiamine biosynthesis protein ThiS; Identified by similarity to EGAD:143246; match to protein family HMM PF02597; match to protein family HMM TIGR01683.
  
  
 0.926
SERP2074
Identified by match to protein family HMM PF00899; match to protein family HMM PF05237.
 
  
 0.918
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
 
 
 0.836
cdr
Coenzyme A disulfide reductase; Catalyzes specifically the NADPH-dependent reduction of coenzyme A disulfide; Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family.
  
 
 0.777
SERP2165
Pyridine nucleotide-disulfide oxidoreductase; Identified by similarity to EGAD:7958; match to protein family HMM PF00070; match to protein family HMM PF02852.
  
 
 0.777
SERP0063
Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.636
SERP2075
Identified by match to protein family HMM PF00597.
       0.532
SERP0035
Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574.
 
  
 0.492
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.