Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SERP0035 | SERP0037 | SERP0035 | SERP0037 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | Identified by match to protein family HMM PF01053. | 0.999 |
| SERP0035 | SERP0095 | SERP0035 | SERP0095 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | Identified by match to protein family HMM PF01053. | 0.992 |
| SERP0035 | SERP2188 | SERP0035 | SERP2188 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | Siroheme synthase, putative; Identified by match to protein family HMM TIGR01470. | 0.498 |
| SERP0035 | cysC | SERP0035 | SERP2185 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.452 |
| SERP0035 | cysH | SERP0035 | SERP2192 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | Phosophoadenylyl-sulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.562 |
| SERP0035 | cysI | SERP0035 | SERP2190 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | Sulfite reductase (NADPH) hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.551 |
| SERP0035 | cysJ | SERP0035 | SERP2191 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | Sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. | 0.949 |
| SERP0035 | cysK | SERP0035 | SERP0152 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | Cysteine synthase; Identified by similarity to SP:P37887; match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.886 |
| SERP0035 | sat | SERP0035 | SERP2186 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | Sulfate adenylyltransferase; Identified by match to protein family HMM PF01747; match to protein family HMM TIGR00339; Belongs to the sulfate adenylyltransferase family. | 0.407 |
| SERP0037 | SERP0035 | SERP0037 | SERP0035 | Identified by match to protein family HMM PF01053. | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | 0.999 |
| SERP0037 | SERP0095 | SERP0037 | SERP0095 | Identified by match to protein family HMM PF01053. | Identified by match to protein family HMM PF01053. | 0.909 |
| SERP0037 | cysC | SERP0037 | SERP2185 | Identified by match to protein family HMM PF01053. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.818 |
| SERP0037 | cysH | SERP0037 | SERP2192 | Identified by match to protein family HMM PF01053. | Phosophoadenylyl-sulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.645 |
| SERP0037 | cysI | SERP0037 | SERP2190 | Identified by match to protein family HMM PF01053. | Sulfite reductase (NADPH) hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.981 |
| SERP0037 | cysJ | SERP0037 | SERP2191 | Identified by match to protein family HMM PF01053. | Sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. | 0.978 |
| SERP0037 | cysK | SERP0037 | SERP0152 | Identified by match to protein family HMM PF01053. | Cysteine synthase; Identified by similarity to SP:P37887; match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.972 |
| SERP0037 | sat | SERP0037 | SERP2186 | Identified by match to protein family HMM PF01053. | Sulfate adenylyltransferase; Identified by match to protein family HMM PF01747; match to protein family HMM TIGR00339; Belongs to the sulfate adenylyltransferase family. | 0.783 |
| SERP0095 | SERP0035 | SERP0095 | SERP0035 | Identified by match to protein family HMM PF01053. | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | 0.992 |
| SERP0095 | SERP0037 | SERP0095 | SERP0037 | Identified by match to protein family HMM PF01053. | Identified by match to protein family HMM PF01053. | 0.909 |
| SERP0095 | cysI | SERP0095 | SERP2190 | Identified by match to protein family HMM PF01053. | Sulfite reductase (NADPH) hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.928 |
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