STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP2196Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. (146 aa)    
Predicted Functional Partners:
SERP2195
Alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase, putative; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852.
  
    0.768
gpxA-2
Glutathione peroxidase; Identified by similarity to EGAD:45646; match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.
  
    0.738
SERP2265
Organic hydroperoxide resistance protein, putative; Identified by similarity to SP:O68390; match to protein family HMM PF02566; Belongs to the OsmC/Ohr family.
 
  
 0.529
SERP0480
Identified by match to protein family HMM PF02566; Belongs to the OsmC/Ohr family.
  
  
 0.461
SERP2197
Hypothetical protein; Identified by Glimmer2; putative.
       0.435
SERP2198
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0238.
       0.435
SERP0561
Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01483; match to protein family HMM TIGR01484.
   
    0.412
clpP
ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
   
  
 0.408
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.