STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP2199Hypothetical protein; Identified by Glimmer2; putative. (369 aa)    
Predicted Functional Partners:
SERP0679
Conserved hypothetical protein; Identified by similarity to OMNI:SA1101.
  
     0.643
SERP1469
Conserved hypothetical protein; Identified by similarity to OMNI:SA1988.
  
     0.589
SERP2197
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.541
SERP0635
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
  
     0.457
SERP1973
General stress protein 26, putative; Identified by similarity to EGAD:107318.
  
     0.442
SERP1779
Conserved hypothetical protein; Identified by similarity to OMNI:SA2169; match to protein family HMM PF04183.
  
     0.441
SERP2198
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0238.
       0.438
SERP1707
Conserved hypothetical protein.
  
     0.436
SERP2009
Conserved hypothetical protein; Identified by match to protein family HMM PF04138.
  
     0.432
SERP2220
Universal stress protein family, putative; Identified by match to protein family HMM PF00582.
 
     0.422
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.