STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP2258Hemolysin, putative; Identified by similarity to GP:1778753. (44 aa)    
Predicted Functional Partners:
SERP0737
Phenol soluble modulin beta 1; Identified by similarity to GP:3212079; match to protein family HMM PF05480.
     
  0.900
SERP0738
Phenol soluble modulin beta 1; Identified by match to protein family HMM PF05480.
     
  0.900
SERP2257
Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by similarity to GP:5777659; match to protein family HMM PF00106; match to protein family HMM PF00678.
       0.414
SERP2259
Transcriptional antiterminator, BglG family; Identified by match to protein family HMM PF00359; match to protein family HMM PF00874.
       0.401
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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