Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SERP0737 | SERP0738 | Phenol soluble modulin beta 1; Identified by similarity to GP:3212079; match to protein family HMM PF05480. | Phenol soluble modulin beta 1; Identified by match to protein family HMM PF05480. | 0.959 |
SERP0737 | SERP2258 | Phenol soluble modulin beta 1; Identified by similarity to GP:3212079; match to protein family HMM PF05480. | Hemolysin, putative; Identified by similarity to GP:1778753. | 0.900 |
SERP0738 | SERP0737 | Phenol soluble modulin beta 1; Identified by match to protein family HMM PF05480. | Phenol soluble modulin beta 1; Identified by similarity to GP:3212079; match to protein family HMM PF05480. | 0.959 |
SERP0738 | SERP2258 | Phenol soluble modulin beta 1; Identified by match to protein family HMM PF05480. | Hemolysin, putative; Identified by similarity to GP:1778753. | 0.900 |
SERP2257 | SERP2258 | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by similarity to GP:5777659; match to protein family HMM PF00106; match to protein family HMM PF00678. | Hemolysin, putative; Identified by similarity to GP:1778753. | 0.414 |
SERP2257 | SERP2259 | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by similarity to GP:5777659; match to protein family HMM PF00106; match to protein family HMM PF00678. | Transcriptional antiterminator, BglG family; Identified by match to protein family HMM PF00359; match to protein family HMM PF00874. | 0.431 |
SERP2258 | SERP0737 | Hemolysin, putative; Identified by similarity to GP:1778753. | Phenol soluble modulin beta 1; Identified by similarity to GP:3212079; match to protein family HMM PF05480. | 0.900 |
SERP2258 | SERP0738 | Hemolysin, putative; Identified by similarity to GP:1778753. | Phenol soluble modulin beta 1; Identified by match to protein family HMM PF05480. | 0.900 |
SERP2258 | SERP2257 | Hemolysin, putative; Identified by similarity to GP:1778753. | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by similarity to GP:5777659; match to protein family HMM PF00106; match to protein family HMM PF00678. | 0.414 |
SERP2258 | SERP2259 | Hemolysin, putative; Identified by similarity to GP:1778753. | Transcriptional antiterminator, BglG family; Identified by match to protein family HMM PF00359; match to protein family HMM PF00874. | 0.401 |
SERP2259 | SERP2257 | Transcriptional antiterminator, BglG family; Identified by match to protein family HMM PF00359; match to protein family HMM PF00874. | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by similarity to GP:5777659; match to protein family HMM PF00106; match to protein family HMM PF00678. | 0.431 |
SERP2259 | SERP2258 | Transcriptional antiterminator, BglG family; Identified by match to protein family HMM PF00359; match to protein family HMM PF00874. | Hemolysin, putative; Identified by similarity to GP:1778753. | 0.401 |