Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SERP2265Organic hydroperoxide resistance protein, putative; Identified by similarity to SP:O68390; match to protein family HMM PF02566; Belongs to the OsmC/Ohr family. (142 aa)    
Predicted Functional Partners:
norR
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
 
  
 0.614
sarZ
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
 
  
 0.610
SERP2196
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
 
  
 0.599
SERP1748
Dps family protein; Identified by match to protein family HMM PF00210; match to protein family HMM PF02047; Belongs to the Dps family.
  
  
 0.519
SERP2264
Cell wall surface anchor family protein.
       0.473
SERP1385
Sensor histidine kinase; Identified by match to protein family HMM PF02518.
  
    0.471
SERP1973
General stress protein 26, putative; Identified by similarity to EGAD:107318.
  
    0.445
SERP0494
Conserved hypothetical protein; Identified by similarity to OMNI:SA0912; match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family.
  
    0.413
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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