STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP2283Phosphonate ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (271 aa)    
Predicted Functional Partners:
phnC
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.998
SERP2286
Phosphonate ABC transporter, phosphonate-binding protein.
 
 
 0.995
SERP2284
Phosphonate ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 
0.989
SERP2288
Identified by match to protein family HMM PF00149; match to protein family HMM PF01009; match to protein family HMM PF02872; Belongs to the 5'-nucleotidase family.
 
   
 0.699
SERP2287
Conserved hypothetical protein.
 
     0.623
SERP0613
Identified by match to protein family HMM PF01009; match to protein family HMM PF02872; Belongs to the 5'-nucleotidase family.
 
   
 0.418
SERP2282
Hypothetical protein; Identified by Glimmer2; putative.
       0.414
SERP1323
Lysophospholipase, putative.
      
 0.412
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
Server load: high (94%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.