Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SERP2287Conserved hypothetical protein. (516 aa)    
Predicted Functional Partners:
SERP2286
Phosphonate ABC transporter, phosphonate-binding protein.
 
     0.768
SERP1589
Hypothetical protein; Identified by Glimmer2; putative.
  
   0.753
rnz
AtsA/ElaC family protein; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
   
   0.706
SERP2288
Identified by match to protein family HMM PF00149; match to protein family HMM PF01009; match to protein family HMM PF02872; Belongs to the 5'-nucleotidase family.
 
    0.682
phnC
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
     0.670
SERP2283
Phosphonate ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
     0.620
SERP2284
Phosphonate ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
     0.609
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.460
cdr
Coenzyme A disulfide reductase; Catalyzes specifically the NADPH-dependent reduction of coenzyme A disulfide; Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family.
   
 
 0.445
SERP2165
Pyridine nucleotide-disulfide oxidoreductase; Identified by similarity to EGAD:7958; match to protein family HMM PF00070; match to protein family HMM PF02852.
   
 
 0.445
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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