STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP2372Peptide ABC transporter, peptide-binding protein; Identified by similarity to EGAD:165398; match to protein family HMM PF00496. (532 aa)    
Predicted Functional Partners:
SERP2371
Peptide ABC transporter, permease protein, putative; Identified by similarity to GP:5457576; match to protein family HMM PF00528.
 0.998
SERP2370
Peptide ABC transporter, permease protein; Identified by similarity to EGAD:128691; match to protein family HMM PF00528.
 0.996
SERP2369
Peptide ABC transporter, ATP-binding protein; Identified by similarity to EGAD:24096; match to protein family HMM PF00005.
 
 
 0.993
SERP2368
Peptide ABC transporter, ATP-binding protein; Identified by similarity to EGAD:10112; match to protein family HMM PF00005.
 
 
 0.983
SERP2374
Conserved hypothetical protein; Identified by similarity to OMNI:SA2478.
 
     0.932
SERP2367
Transporter, putative.
 
     0.919
SERP0953
Peptide ABC transporter, permease protein, putative; Identified by match to protein family HMM PF00528.
 
 0.873
SERP2373
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA2353.
       0.855
SERP0952
Peptide ABC transporter, permease protein, putative; Identified by similarity to EGAD:9991; match to protein family HMM PF00528.
 
 0.849
oppB
Oligopeptide ABC transporter, permease protein; Identified by similarity to EGAD:8134; match to protein family HMM PF00528.
 
 0.821
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.