Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SERP2384Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA2469. (368 aa)    
Predicted Functional Partners:
SERP2385
Conserved domain protein; Identified by similarity to EGAD:7439.
 
   
 0.936
SERP2386
Cobalamin synthesis protein, putative; Identified by match to protein family HMM PF02492.
 
    0.901
ahpC
Alkyl hydroperoxide reductase, C subunit; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
 
 0.638
SERP2111
Thioredoxin, putative.
 
 
 0.585
SERP0408
Conserved hypothetical protein; Identified by similarity to OMNI:SA0804.
 
 
 0.526
SERP0488
Thioredoxin, putative.
  
 
 0.476
SERP2383
ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.466
SERP0483
Thioredoxin, putative; Identified by match to protein family HMM PF00085.
  
 
 0.441
trxA
Thioredoxin; Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity).
  
 
 0.441
SERP1304
Thioredoxin, putative; Identified by match to protein family HMM PF00085.
  
 
 0.441
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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