STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yycIyycI protein; Identified by similarity to OMNI:SA0022. (263 aa)    
Predicted Functional Partners:
yycH
yycH protein; Identified by similarity to GP:6689208.
 
  
 0.994
yycG
Sensory box histidine kinase YycG; Member of the two-component regulatory system WalK/WalR that regulates genes involved in autolysis, biofilm formation and cell wall metabolism. WalK functions as a sensor protein kinase which is autophosphorylated at a histidine residue and transfers its phosphate group to WalR.
 
  
 0.985
yycF
DNA-binding response regulator YycF; Member of the two-component regulatory system WalK/WalR.
  
  
 0.954
yycJ
Identified by match to protein family HMM PF00753.
  
  
 0.909
camS
Staphylococcus epidermidis sex pheromone; Identified by similarity to OMNI:NTL01SA1780.
  
     0.692
SERP1248
Replication initiation and membrane attachment protein; Identified by similarity to EGAD:12808.
  
     0.671
SERP0975
xpaC protein, putative; Identified by similarity to EGAD:19663.
  
     0.643
SERP1050
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA1365.
  
     0.625
SERP1733
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA2005.
  
     0.625
SERP2540
Membrane protein, putative; Identified by similarity to OMNI:NTL01SA0014.
 
     0.625
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.