STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yycHyycH protein; Identified by similarity to GP:6689208. (445 aa)    
Predicted Functional Partners:
yycI
yycI protein; Identified by similarity to OMNI:SA0022.
 
  
 0.994
yycG
Sensory box histidine kinase YycG; Member of the two-component regulatory system WalK/WalR that regulates genes involved in autolysis, biofilm formation and cell wall metabolism. WalK functions as a sensor protein kinase which is autophosphorylated at a histidine residue and transfers its phosphate group to WalR.
 
  
 0.979
yycF
DNA-binding response regulator YycF; Member of the two-component regulatory system WalK/WalR.
  
  
 0.953
yycJ
Identified by match to protein family HMM PF00753.
  
  
 0.899
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
   
 0.800
ebpS
Elastin binding protein, putative; Identified by match to protein family HMM PF01476.
  
     0.764
yvcD
yvcD protein; Identified by similarity to GP:5690062; match to protein family HMM PF00515.
  
     0.752
SERP0581
Conserved hypothetical protein; Identified by similarity to OMNI:SA1006; Belongs to the UPF0413 family.
  
     0.744
SERP2540
Membrane protein, putative; Identified by similarity to OMNI:NTL01SA0014.
 
     0.742
SERP1371
ABC transporter, permease protein; Identified by similarity to EGAD:35133.
  
     0.733
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.