STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Atu0158ABC transporter, membrane spanning protein. (257 aa)    
Predicted Functional Partners:
Atu0159
ABC transporter, nucleotide binding/ATPase protein.
 
 
 0.976
Atu0157
ABC transporter, substrate binding protein.
 
 
 0.936
Atu4598
ABC transporter, nucleotide binding/ATPase protein.
 
 
 0.862
ssuA
ABC transporter, substrate binding protein (aliphatic sulfonate).
 
 
 0.847
Atu4154
ABC transporter, substrate binding protein (aliphatic sulfonate).
 
 
 0.844
ssuB1
ABC transporter, nucleotide binding/ATPase protein (aliphatic sulfonate); Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.844
Atu1047
ABC transporter, nucleotide binding/ATPase protein.
 
 
 0.836
Atu4261
ABC transporter, nucleotide binding/ATPase protein.
 
 
 0.833
nrtC
ABC transporter, nucleotide binding/ATPase protein (nitrate).
 
 
 0.799
Atu4402
ABC transporter, membrane spanning protein (anion).
  
     0.727
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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