Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phnEABC transporter, membrane spanning protein (phosphonate). (449 aa)    
Predicted Functional Partners:
phnE-2
ABC transporter, membrane spanning protein (phosphonate).
 
  
 
0.991
phnD
ABC transporter, substrate binding protein (phosphonate).
 
 
 0.989
phnC
ABC transporter, nucleotide binding/ATPase protein (phosphonate); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.985
phnM
Conserved hypothetical protein.
 
  
 0.858
phnI
Conserved hypothetical protein.
 
  
 0.850
phnH
Conserved hypothetical protein.
 
  
 0.849
phnK
ABC transporter, nucleotide binding/ATPase protein (phosphonate).
 
  
 0.847
phnL
ABC transporter, nucleotide binding/ATPase protein (phosphonate).
 
  
 0.842
phnJ
Conserved hypothetical protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
  
 0.840
phnG
Conserved hypothetical protein.
 
  
 0.829
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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