Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu0175 | Atu1236 | Atu0175 | Atu1236 | Acetyltransferase. | Polysaccharide biosynthesis glycosyltransferase. | 0.724 |
Atu0175 | phnC | Atu0175 | Atu0174 | Acetyltransferase. | ABC transporter, nucleotide binding/ATPase protein (phosphonate); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.664 |
Atu0175 | phnD | Atu0175 | Atu0173 | Acetyltransferase. | ABC transporter, substrate binding protein (phosphonate). | 0.553 |
Atu0175 | phnG | Atu0175 | Atu0181 | Acetyltransferase. | Conserved hypothetical protein. | 0.651 |
Atu0175 | phnH | Atu0175 | Atu0180 | Acetyltransferase. | Conserved hypothetical protein. | 0.695 |
Atu0175 | phnI | Atu0175 | Atu0179 | Acetyltransferase. | Conserved hypothetical protein. | 0.702 |
Atu0175 | phnJ | Atu0175 | Atu0178 | Acetyltransferase. | Conserved hypothetical protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. | 0.812 |
Atu0175 | phnK | Atu0175 | Atu0177 | Acetyltransferase. | ABC transporter, nucleotide binding/ATPase protein (phosphonate). | 0.797 |
Atu0175 | phnL | Atu0175 | Atu0176 | Acetyltransferase. | ABC transporter, nucleotide binding/ATPase protein (phosphonate). | 0.888 |
Atu0175 | phnM | Atu0175 | Atu0169 | Acetyltransferase. | Conserved hypothetical protein. | 0.556 |
Atu1236 | Atu0175 | Atu1236 | Atu0175 | Polysaccharide biosynthesis glycosyltransferase. | Acetyltransferase. | 0.724 |
phnC | Atu0175 | Atu0174 | Atu0175 | ABC transporter, nucleotide binding/ATPase protein (phosphonate); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | Acetyltransferase. | 0.664 |
phnC | phnD | Atu0174 | Atu0173 | ABC transporter, nucleotide binding/ATPase protein (phosphonate); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | ABC transporter, substrate binding protein (phosphonate). | 0.996 |
phnC | phnG | Atu0174 | Atu0181 | ABC transporter, nucleotide binding/ATPase protein (phosphonate); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | Conserved hypothetical protein. | 0.956 |
phnC | phnH | Atu0174 | Atu0180 | ABC transporter, nucleotide binding/ATPase protein (phosphonate); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | Conserved hypothetical protein. | 0.965 |
phnC | phnI | Atu0174 | Atu0179 | ABC transporter, nucleotide binding/ATPase protein (phosphonate); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | Conserved hypothetical protein. | 0.941 |
phnC | phnJ | Atu0174 | Atu0178 | ABC transporter, nucleotide binding/ATPase protein (phosphonate); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | Conserved hypothetical protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. | 0.961 |
phnC | phnK | Atu0174 | Atu0177 | ABC transporter, nucleotide binding/ATPase protein (phosphonate); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | ABC transporter, nucleotide binding/ATPase protein (phosphonate). | 0.981 |
phnC | phnL | Atu0174 | Atu0176 | ABC transporter, nucleotide binding/ATPase protein (phosphonate); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | ABC transporter, nucleotide binding/ATPase protein (phosphonate). | 0.989 |
phnC | phnM | Atu0174 | Atu0169 | ABC transporter, nucleotide binding/ATPase protein (phosphonate); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | Conserved hypothetical protein. | 0.920 |
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