Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu0148 | Atu0215 | Atu0148 | Atu0215 | Atu0148-1 mutant of a conserved hypothetical protein. | Conserved hypothetical protein. | 0.806 |
Atu0148 | ctpA | Atu0148 | Atu0224 | Atu0148-1 mutant of a conserved hypothetical protein. | Components of type IV pilus, pilin subunit. | 0.760 |
Atu0148 | ctpB | Atu0148 | Atu0223 | Atu0148-1 mutant of a conserved hypothetical protein. | Components of type IV pilus, prepilin peptidase. | 0.855 |
Atu0148 | ctpC | Atu0148 | Atu0222 | Atu0148-1 mutant of a conserved hypothetical protein. | Components of type IV pilus. | 0.912 |
Atu0148 | ctpD | Atu0148 | Atu0221 | Atu0148-1 mutant of a conserved hypothetical protein. | Component of type IV pilus; Belongs to the bacterial secretin family. | 0.820 |
Atu0148 | ctpE | Atu0148 | Atu0220 | Atu0148-1 mutant of a conserved hypothetical protein. | Components of type IV pilus. | 0.781 |
Atu0148 | ctpF | Atu0148 | Atu0219 | Atu0148-1 mutant of a conserved hypothetical protein. | Components of type IV pilus. | 0.928 |
Atu0148 | ctpG | Atu0148 | Atu0218 | Atu0148-1 mutant of a conserved hypothetical protein. | Component of type IV pilus. | 0.744 |
Atu0148 | ctpH | Atu0148 | Atu0217 | Atu0148-1 mutant of a conserved hypothetical protein. | Components of type IV pilus. | 0.887 |
Atu0148 | ctpI | Atu0148 | Atu0216 | Atu0148-1 mutant of a conserved hypothetical protein. | Components of type IV pilus. | 0.821 |
Atu0215 | Atu0148 | Atu0215 | Atu0148 | Conserved hypothetical protein. | Atu0148-1 mutant of a conserved hypothetical protein. | 0.806 |
Atu0215 | ctpA | Atu0215 | Atu0224 | Conserved hypothetical protein. | Components of type IV pilus, pilin subunit. | 0.759 |
Atu0215 | ctpB | Atu0215 | Atu0223 | Conserved hypothetical protein. | Components of type IV pilus, prepilin peptidase. | 0.833 |
Atu0215 | ctpC | Atu0215 | Atu0222 | Conserved hypothetical protein. | Components of type IV pilus. | 0.836 |
Atu0215 | ctpD | Atu0215 | Atu0221 | Conserved hypothetical protein. | Component of type IV pilus; Belongs to the bacterial secretin family. | 0.827 |
Atu0215 | ctpE | Atu0215 | Atu0220 | Conserved hypothetical protein. | Components of type IV pilus. | 0.801 |
Atu0215 | ctpF | Atu0215 | Atu0219 | Conserved hypothetical protein. | Components of type IV pilus. | 0.845 |
Atu0215 | ctpG | Atu0215 | Atu0218 | Conserved hypothetical protein. | Component of type IV pilus. | 0.718 |
Atu0215 | ctpH | Atu0215 | Atu0217 | Conserved hypothetical protein. | Components of type IV pilus. | 0.831 |
Atu0215 | ctpI | Atu0215 | Atu0216 | Conserved hypothetical protein. | Components of type IV pilus. | 0.841 |
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