Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pfs5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase. (212 aa)    
Predicted Functional Partners:
ahcY
S-adenosylhomocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.914
Atu2215
Conserved hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
    
 0.904
Atu0283
Conserved hypothetical protein.
     
 0.888
guaA-2
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.732
tspO
Tryptophan-rich sensory protein.
       0.654
Atu1203
Hypothetical protein.
 
     0.563
Atu0285
Conserved hypothetical protein.
       0.553
Atu0286
Conserved hypothetical protein.
       0.553
Atu0287
Conserved hypothetical protein.
       0.553
metC
Cystathionine beta lyase.
  
 
 0.539
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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