Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rlpA-2Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (122 aa)    
Predicted Functional Partners:
sun
Sun protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.615
ptrB
Protease II.
   
  
 0.532
tolB
tolB protein; Belongs to the TolB family.
  
 
 0.502
tolB-2
tolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.502
Atu1700
Lipoprotein.
  
 
 0.498
flaD
Flagellin protein FlaD; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
    
 
 0.474
fla
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
    
 
 0.473
flaB
flaB; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
    
 
 0.473
flaA
Flagella associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
    
 
 0.473
Atu0333
ABC transporter, nucleotide binding/ATPase protein.
 
   0.425
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.