STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fbpA3ABC transporter, membrane spanning protein. (558 aa)    
Predicted Functional Partners:
fbpA1
ABC transporter, nucleotide binding/ATPase protein; Belongs to the ABC transporter superfamily.
 
 0.980
fbpA
ABC transporter, substrate binding protein (iron).
 
  
 0.937
Atu0202
ABC transporter, substrate binding protein (iron).
 
  
 0.875
Atu4578
ABC transporter, nucleotide binding/ATPase protein; Belongs to the ABC transporter superfamily.
 
 0.869
afuC
ABC transporter, nucleotide binding/ATPase protein (iron); Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
 0.869
Atu2012
ABC transporter, nucleotide binding/ATPase protein.
 
  
  0.824
Atu4577
ABC transporter, substrate binding protein.
 
  
 0.710
afuA
ABC transporter, substrate binding protein (iron).
 
  
 0.501
afuA-2
ABC transporter, substrate binding protein (iron).
 
  
 0.479
irr
Transcriptional regulator, Fur family; Belongs to the Fur family.
     
 0.476
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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