Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu0027 | Atu0419 | Atu0027 | Atu0419 | Two component sensor kinase. | Two component sensor kinase. | 0.653 |
Atu0027 | Atu0527 | Atu0027 | Atu0527 | Two component sensor kinase. | Two component sensor kinase/response regulator hybrid. | 0.905 |
Atu0027 | Atu1362 | Atu0027 | Atu1362 | Two component sensor kinase. | Two component sensor kinase. | 0.888 |
Atu0027 | Atu2332 | Atu0027 | Atu2332 | Two component sensor kinase. | Two component sensor kinase/response regulator hybrid. | 0.863 |
Atu0027 | Atu4047 | Atu0027 | Atu4047 | Two component sensor kinase. | Two component sensor kinase/response regulator hybrid. | 0.958 |
Atu0027 | Atu4639 | Atu0027 | Atu4639 | Two component sensor kinase. | Two component sensor kinase. | 0.413 |
Atu0027 | phoB | Atu0027 | Atu0425 | Two component sensor kinase. | Two component response regulator. | 0.791 |
Atu0027 | phoU | Atu0027 | Atu0424 | Two component sensor kinase. | Phosphate transport system regulatory protein; Plays a role in the regulation of phosphate uptake. | 0.450 |
Atu0419 | Atu0027 | Atu0419 | Atu0027 | Two component sensor kinase. | Two component sensor kinase. | 0.653 |
Atu0419 | Atu0527 | Atu0419 | Atu0527 | Two component sensor kinase. | Two component sensor kinase/response regulator hybrid. | 0.694 |
Atu0419 | Atu1362 | Atu0419 | Atu1362 | Two component sensor kinase. | Two component sensor kinase. | 0.668 |
Atu0419 | Atu2332 | Atu0419 | Atu2332 | Two component sensor kinase. | Two component sensor kinase/response regulator hybrid. | 0.725 |
Atu0419 | Atu4047 | Atu0419 | Atu4047 | Two component sensor kinase. | Two component sensor kinase/response regulator hybrid. | 0.749 |
Atu0419 | Atu4639 | Atu0419 | Atu4639 | Two component sensor kinase. | Two component sensor kinase. | 0.403 |
Atu0419 | phoB | Atu0419 | Atu0425 | Two component sensor kinase. | Two component response regulator. | 0.988 |
Atu0419 | phoU | Atu0419 | Atu0424 | Two component sensor kinase. | Phosphate transport system regulatory protein; Plays a role in the regulation of phosphate uptake. | 0.683 |
Atu0527 | Atu0027 | Atu0527 | Atu0027 | Two component sensor kinase/response regulator hybrid. | Two component sensor kinase. | 0.905 |
Atu0527 | Atu0419 | Atu0527 | Atu0419 | Two component sensor kinase/response regulator hybrid. | Two component sensor kinase. | 0.694 |
Atu0527 | Atu1362 | Atu0527 | Atu1362 | Two component sensor kinase/response regulator hybrid. | Two component sensor kinase. | 0.977 |
Atu0527 | Atu2332 | Atu0527 | Atu2332 | Two component sensor kinase/response regulator hybrid. | Two component sensor kinase/response regulator hybrid. | 0.977 |
page 1 of 5