Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu0479ABC transporter, substrate binding protein (amino acid). (253 aa)    
Predicted Functional Partners:
Atu2364
ABC transporter, membrane spanning protein.
 
 
 0.769
Atu1880
ABC transporter, membrane spanning protein (amino acid).
 
 
 0.764
Atu3359
ABC transporter, membrane spanning protein (amino acid).
 
 
 0.757
Atu1881
ABC transporter, membrane spanning protein (amino acid).
 
  
 0.749
Atu3358
ABC transporter, membrane spanning protein (amino acid).
  
   0.747
Atu2363
ABC transporter, membrane spanning protein.
 
  
 0.746
Atu4234
ABC transporter, membrane spanning protein (amino acid).
  
   0.741
Atu4754
ABC transporter, membrane spanning protein (amino acid).
  
   0.739
Atu4281
ABC transporter, membrane spanning protein (amino acid).
  
   0.737
Atu4537
ABC transporter, membrane spanning protein (amino acid).
  
   0.733
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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