STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheYChemotaxis receiver protein. (121 aa)    
Predicted Functional Partners:
cheA
Chemotaxis protein histidine kinase.
 0.997
Atu0515
Conserved hypothetical protein.
 
 
 0.991
Atu0514
Methyl-accepting chemotaxis protein.
 
 0.984
cheY-2
Chemotaxis receiver protein.
 
 
0.971
cheW-2
Chemotaxis protein.
 
 0.955
cheW
Chemotaxis protein.
 
 0.954
cheD-2
Methyl-accepting chemotaxis protein.
 
 0.946
mcpA-6
Methyl-accepting chemotaxis protein.
 
 0.944
mcpG
Chemotaxis methyl-accepting protein.
 
 0.943
Atu4736
Methyl-accepting chemotaxis protein.
 
 0.934
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.