STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atu0568Conserved hypothetical protein. (218 aa)    
Predicted Functional Partners:
Atu0570
Chemotaxis protein.
 
     0.966
motB
Flagellar motor protein, PAL/OmpA family.
 
     0.944
fliL
Flagellar protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
   
 0.890
Atu8132
Conserved hypothetical protein.
 
   
 0.890
Atu0585
Conserved hypothetical protein.
 
   
 0.882
Atu0572
Conserved hypothetical protein.
 
     0.869
motD
Chemotaxis MotD protein.
       0.861
flaD
Flagellin protein FlaD; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   
 0.858
Atu0565
Conserved hypothetical protein; To R.meliloti R00649.
 
     0.830
flgL
Flagellar hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   
 0.817
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.