Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu0549 | flgD | Atu0549 | Atu0579 | Conserved hypothetical protein. | Hook formation protein. | 0.899 |
Atu0549 | flgE | Atu0549 | Atu0574 | Conserved hypothetical protein. | Flagellar hook protein. | 0.980 |
Atu0549 | flgH | Atu0549 | Atu0548 | Conserved hypothetical protein. | Flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.991 |
Atu0549 | fliF | Atu0549 | Atu0523 | Conserved hypothetical protein. | Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.979 |
Atu0549 | fliG | Atu0549 | Atu0563 | Conserved hypothetical protein. | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). | 0.961 |
Atu0549 | fliI | Atu0549 | Atu0557 | Conserved hypothetical protein. | Flagellum-specific ATP synthase; Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum. | 0.904 |
Atu0549 | fliL | Atu0549 | Atu0547 | Conserved hypothetical protein. | Flagellar protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.997 |
Atu0549 | fliM | Atu0549 | Atu0561 | Conserved hypothetical protein. | Flagellar motor switch protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). | 0.983 |
Atu0549 | fliN | Atu0549 | Atu0562 | Conserved hypothetical protein. | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). Belongs to the FliN/MopA/SpaO family. | 0.960 |
Atu0549 | motD | Atu0549 | Atu0571 | Conserved hypothetical protein. | Chemotaxis MotD protein. | 0.952 |
flgD | Atu0549 | Atu0579 | Atu0549 | Hook formation protein. | Conserved hypothetical protein. | 0.899 |
flgD | flgE | Atu0579 | Atu0574 | Hook formation protein. | Flagellar hook protein. | 0.998 |
flgD | flgH | Atu0579 | Atu0548 | Hook formation protein. | Flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.997 |
flgD | fliF | Atu0579 | Atu0523 | Hook formation protein. | Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.992 |
flgD | fliG | Atu0579 | Atu0563 | Hook formation protein. | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). | 0.988 |
flgD | fliI | Atu0579 | Atu0557 | Hook formation protein. | Flagellum-specific ATP synthase; Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum. | 0.987 |
flgD | fliL | Atu0579 | Atu0547 | Hook formation protein. | Flagellar protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.973 |
flgD | fliM | Atu0579 | Atu0561 | Hook formation protein. | Flagellar motor switch protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). | 0.971 |
flgD | fliN | Atu0579 | Atu0562 | Hook formation protein. | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). Belongs to the FliN/MopA/SpaO family. | 0.994 |
flgD | motD | Atu0579 | Atu0571 | Hook formation protein. | Chemotaxis MotD protein. | 0.975 |
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