Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
Atu0572Conserved hypothetical protein. (147 aa)    
Predicted Functional Partners:
motB
Flagellar motor protein, PAL/OmpA family.
 
  
 0.961
Atu0570
Chemotaxis protein.
 
   
 0.953
Atu0568
Conserved hypothetical protein.
 
     0.869
flgL
Flagellar hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.861
motD
Chemotaxis MotD protein.
  
    0.850
flaF
FLAF protein.
 
     0.839
flgK
Flagellar hook associated protein.
 
    0.837
Atu0573
Transcriptional regulator.
 
   
 0.833
Atu0559
Conserved hypothetical protein.
 
   0.829
flbT
FlbT post-transcriptional regulator of flagellin; Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation.
 
     0.828
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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