Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu0673 | Atu0674 | Atu0673 | Atu0674 | Hypothetical protein. | Conserved hypothetical protein. | 0.804 |
Atu0673 | Atu0675 | Atu0673 | Atu0675 | Hypothetical protein. | Conserved hypothetical protein. | 0.829 |
Atu0673 | Atu0677 | Atu0673 | Atu0677 | Hypothetical protein. | Conserved hypothetical protein. | 0.529 |
Atu0673 | hisG | Atu0673 | Atu0679 | Hypothetical protein. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily. | 0.492 |
Atu0673 | hisS-1 | Atu0673 | Atu0676 | Hypothetical protein. | histidyl-tRNA synthetase. | 0.577 |
Atu0673 | hisS-2 | Atu0673 | Atu0678 | Hypothetical protein. | histidyl-tRNA synthetase; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine. | 0.492 |
Atu0674 | Atu0673 | Atu0674 | Atu0673 | Conserved hypothetical protein. | Hypothetical protein. | 0.804 |
Atu0674 | Atu0675 | Atu0674 | Atu0675 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.961 |
Atu0674 | Atu0677 | Atu0674 | Atu0677 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.529 |
Atu0674 | Atu0935 | Atu0674 | Atu0935 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.924 |
Atu0674 | Atu2326 | Atu0674 | Atu2326 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.502 |
Atu0674 | Atu8138 | Atu0674 | Atu8138 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.411 |
Atu0674 | hisG | Atu0674 | Atu0679 | Conserved hypothetical protein. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily. | 0.515 |
Atu0674 | hisS-1 | Atu0674 | Atu0676 | Conserved hypothetical protein. | histidyl-tRNA synthetase. | 0.555 |
Atu0674 | hisS-2 | Atu0674 | Atu0678 | Conserved hypothetical protein. | histidyl-tRNA synthetase; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine. | 0.512 |
Atu0675 | Atu0673 | Atu0675 | Atu0673 | Conserved hypothetical protein. | Hypothetical protein. | 0.829 |
Atu0675 | Atu0674 | Atu0675 | Atu0674 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.961 |
Atu0675 | Atu0677 | Atu0675 | Atu0677 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.529 |
Atu0675 | Atu0935 | Atu0675 | Atu0935 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.525 |
Atu0675 | Atu2325 | Atu0675 | Atu2325 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.481 |
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