Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dgoK2-dehydro-3-deoxygalactonate kinase. (304 aa)    
Predicted Functional Partners:
kdgA
Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase.
 
 
 0.997
Atu0702
Calcium-binding protein, regucalcin.
 
   
 0.930
fabG
3-oxoacyl-(acyl carrier protein) reductase.
 
     0.917
kdgR
Transcriptional regulator, IclR family.
 
   
 0.626
Atu1113
Dehydrogenase.
 
   
 0.486
Atu3962
Calcium-binding protein, regucalcin.
 
     0.463
ilvD-3
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
   
 0.445
Atu4190
Calcium-binding protein, regucalcin.
 
     0.442
Atu4196
Conserved hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.439
Atu4481
Transcriptional regulator, LacI family.
  
     0.413
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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