Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu0748 | Atu0750 | Atu0748 | Atu0750 | Deacetylase. | ABC transporter, membrane spanning protein. | 0.739 |
Atu0748 | Atu0751 | Atu0748 | Atu0751 | Deacetylase. | ABC transporter, nucleotide binding/ATPase protein (cobalt). | 0.739 |
Atu0748 | Atu0752 | Atu0748 | Atu0752 | Deacetylase. | Conserved hypothetical protein. | 0.539 |
Atu0748 | bioY | Atu0748 | Atu0749 | Deacetylase. | Biotin synthesis BioY protein. | 0.725 |
Atu0748 | xseB | Atu0748 | Atu0747 | Deacetylase. | Exodeoxyribonuclease small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.804 |
Atu0750 | Atu0748 | Atu0750 | Atu0748 | ABC transporter, membrane spanning protein. | Deacetylase. | 0.739 |
Atu0750 | Atu0751 | Atu0750 | Atu0751 | ABC transporter, membrane spanning protein. | ABC transporter, nucleotide binding/ATPase protein (cobalt). | 0.999 |
Atu0750 | Atu0752 | Atu0750 | Atu0752 | ABC transporter, membrane spanning protein. | Conserved hypothetical protein. | 0.602 |
Atu0750 | bioY | Atu0750 | Atu0749 | ABC transporter, membrane spanning protein. | Biotin synthesis BioY protein. | 0.999 |
Atu0750 | xseB | Atu0750 | Atu0747 | ABC transporter, membrane spanning protein. | Exodeoxyribonuclease small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.746 |
Atu0751 | Atu0748 | Atu0751 | Atu0748 | ABC transporter, nucleotide binding/ATPase protein (cobalt). | Deacetylase. | 0.739 |
Atu0751 | Atu0750 | Atu0751 | Atu0750 | ABC transporter, nucleotide binding/ATPase protein (cobalt). | ABC transporter, membrane spanning protein. | 0.999 |
Atu0751 | Atu0752 | Atu0751 | Atu0752 | ABC transporter, nucleotide binding/ATPase protein (cobalt). | Conserved hypothetical protein. | 0.602 |
Atu0751 | bioY | Atu0751 | Atu0749 | ABC transporter, nucleotide binding/ATPase protein (cobalt). | Biotin synthesis BioY protein. | 0.998 |
Atu0751 | xseB | Atu0751 | Atu0747 | ABC transporter, nucleotide binding/ATPase protein (cobalt). | Exodeoxyribonuclease small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.740 |
Atu0752 | Atu0748 | Atu0752 | Atu0748 | Conserved hypothetical protein. | Deacetylase. | 0.539 |
Atu0752 | Atu0750 | Atu0752 | Atu0750 | Conserved hypothetical protein. | ABC transporter, membrane spanning protein. | 0.602 |
Atu0752 | Atu0751 | Atu0752 | Atu0751 | Conserved hypothetical protein. | ABC transporter, nucleotide binding/ATPase protein (cobalt). | 0.602 |
Atu0752 | bioY | Atu0752 | Atu0749 | Conserved hypothetical protein. | Biotin synthesis BioY protein. | 0.595 |
Atu0752 | xseB | Atu0752 | Atu0747 | Conserved hypothetical protein. | Exodeoxyribonuclease small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.550 |
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