Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu0797Hydrolase. (203 aa)    
Predicted Functional Partners:
Atu3401
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.900
hadL
Haloalkanoic acid dehalogenase.
     
  0.900
Atu3950
Aldehyde dehydrogenase.
     
  0.900
Atu4849
NADP-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.900
mutY
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
     
 0.887
Atu8137
Conserved hypothetical protein.
       0.760
Atu0796
Putative peptidase.
       0.623
Atu0795
Hypothetical protein.
       0.502
Atu0800
Conserved hypothetical protein.
       0.474
Atu3718
Conserved hypothetical protein.
  
  
 0.412
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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