Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Atu0796 | Atu0797 | Atu0796 | Atu0797 | Putative peptidase. | Hydrolase. | 0.625 |
| Atu0796 | Atu8137 | Atu0796 | Atu8137 | Putative peptidase. | Conserved hypothetical protein. | 0.448 |
| Atu0796 | mutY | Atu0796 | Atu0798 | Putative peptidase. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.623 |
| Atu0797 | Atu0796 | Atu0797 | Atu0796 | Hydrolase. | Putative peptidase. | 0.625 |
| Atu0797 | Atu8137 | Atu0797 | Atu8137 | Hydrolase. | Conserved hypothetical protein. | 0.608 |
| Atu0797 | mutY | Atu0797 | Atu0798 | Hydrolase. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.808 |
| Atu1714 | Atu2761 | Atu1714 | Atu2761 | Exonuclease III. | Exodeoxyribonuclease III. | 0.919 |
| Atu1714 | dnaN | Atu1714 | Atu0301 | Exonuclease III. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.670 |
| Atu1714 | mutY | Atu1714 | Atu0798 | Exonuclease III. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.592 |
| Atu2011 | dnaN | Atu2011 | Atu0301 | Conserved hypothetical protein. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.670 |
| Atu2011 | mutY | Atu2011 | Atu0798 | Conserved hypothetical protein. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.572 |
| Atu2761 | Atu1714 | Atu2761 | Atu1714 | Exodeoxyribonuclease III. | Exonuclease III. | 0.919 |
| Atu2761 | dnaN | Atu2761 | Atu0301 | Exodeoxyribonuclease III. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.670 |
| Atu2761 | mutY | Atu2761 | Atu0798 | Exodeoxyribonuclease III. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.592 |
| Atu8137 | Atu0796 | Atu8137 | Atu0796 | Conserved hypothetical protein. | Putative peptidase. | 0.448 |
| Atu8137 | Atu0797 | Atu8137 | Atu0797 | Conserved hypothetical protein. | Hydrolase. | 0.608 |
| Atu8137 | mutY | Atu8137 | Atu0798 | Conserved hypothetical protein. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.608 |
| cat | mutY | Atu4738 | Atu0798 | Chloramphenicol acetyltransferase; This enzyme is an effector of chloramphenicol resistance in bacteria; Belongs to the transferase hexapeptide repeat family. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.547 |
| dnaN | Atu1714 | Atu0301 | Atu1714 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | Exonuclease III. | 0.670 |
| dnaN | Atu2011 | Atu0301 | Atu2011 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | Conserved hypothetical protein. | 0.670 |
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