Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ohrRTranscriptional regulator, MarR family. (152 aa)    
Predicted Functional Partners:
ohr
Organic hydroperoxide resistance protein.
  
 0.962
Atu4504
Transcriptional regulator, MarR family.
  
     0.502
slyA
Transcriptional regulator, MarR family.
      
 0.490
grx
Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
     
 0.485
fadB-2
enoyl-CoA hydratase.
     
 0.479
pecS
Transcriptional regulator, MarR family.
      
 0.477
Atu3481
Enoyl-CoA hydratase/isomerase family protein.
   
  
 0.463
Atu3505
enoyl-CoA hydratase.
   
  
 0.463
fadB
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  
 0.462
fad
enoyl-CoA hydratase.
   
  
 0.447
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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